CDS

Accession Number TCMCG017C19027
gbkey CDS
Protein Id OMO86390.1
Location complement(join(28650..28728,29389..30338))
GeneID InterPro:IPR002867
Organism Corchorus olitorius
locus_tag COLO4_21200

Protein

Length 342aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017580.1
Definition Zinc finger, C6HC-type [Corchorus olitorius]
Locus_tag COLO4_21200

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11975        [VIEW IN KEGG]
EC 2.3.2.31        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031624        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032434        [VIEW IN EMBL-EBI]
GO:0032436        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044390        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061136        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901800        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903050        [VIEW IN EMBL-EBI]
GO:1903052        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903364        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000058        [VIEW IN EMBL-EBI]
GO:2000060        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGGCCGTTACTTCCATTGATCAAGAAACATCAGGATTGAAGAATCCGAAAATGGAGAAACCCAATTTCTCTCGACAGGTTGAGATCGTTGATCTTGAAAGCGACGATTTTGATTTTTTTACAGACAAAGGCACCACCAAGGGAAACGCAATTTCAGTTGAAGACTACATTGAACAAAGGGACATCGAACTTGCCATCAAGGCTTCCATCAACACCGCAACCTCCGACAACAATAACTACATAGATCTCGACATCTATGACGATGACTTGATCCTGCTTACTTTCGAGCCCCCAAATACCCATTTTGGGAAGAAGCGTGAAAATGGAGTGAAACCCTTCAGCGATCACTCTGTAACTGAACCTGGAGAGTCCTCAAACTCAAAAGCAAGCAAAGACCCACATTTTATCTGTGATATTTGCGTTGAACCAAAGGAAGAAAACGAGTCCTTTAGCATCAAAGGTTGCTCTCACGCTTACTGTACGGACTGCATGATCAAGTATGTAGCTTCTAAATTGCAAGATAAGATTTCATCCATAACTTGCCCCGTGCCTAACTGTAAGGGTATATTAGAACCTGAATACTGTCGTAATTTACTTCCCAGAGAAGTTTTTGAGAGGTGGGGAGATGCTTTATGCGAGGCAATGATTTTCGGGTCTGAAAGATTTTATTGTCCTTATAAAGATTGTTCCATGGTTCTGATTGATGATGGAGGACAGGCTGTGAAGGAATCGGAGTGTCCTAATTGCAGGAGACTGTTTTGTGCACAGTGTAAAGTTCCTTGGCATGCTGACATTGATTGTAGGGAATTTCAGAGGTTGCATAAAGATGAAAGAGAGAGGGAAGATATTATGTTGATGAAGCTTGCTAAGGACAAGAAATGGGCTAGGTGCCCAAGGTGTAGATTCGTTGTTGAGAGAACTATGGGTTGTAGGTACATGAGCTGCAGGTGTGGCACAGCTTTTTGCTACGACTGTGGATCAACCCAAGTGAATGCTCAGCATTATTGCCTTGCTTGCAAACGTTAA
Protein:  
MMAVTSIDQETSGLKNPKMEKPNFSRQVEIVDLESDDFDFFTDKGTTKGNAISVEDYIEQRDIELAIKASINTATSDNNNYIDLDIYDDDLILLTFEPPNTHFGKKRENGVKPFSDHSVTEPGESSNSKASKDPHFICDICVEPKEENESFSIKGCSHAYCTDCMIKYVASKLQDKISSITCPVPNCKGILEPEYCRNLLPREVFERWGDALCEAMIFGSERFYCPYKDCSMVLIDDGGQAVKESECPNCRRLFCAQCKVPWHADIDCREFQRLHKDEREREDIMLMKLAKDKKWARCPRCRFVVERTMGCRYMSCRCGTAFCYDCGSTQVNAQHYCLACKR